Abstract Browser (by Title)

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IDTitleSection/TopicAuthorsKeywords
6073’UTR Profiling: Resolution of Differential Expression by Closely-Related Transcripts and Identification of Novel Sequences
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Emerging Genome TechnologiesEveland, Andrea L; Kirst, Matias; Latshaw, Susan P; Avigne, W.T.; McCarty, Donald R; Koch, Karen E.454
ABA
3'UTR
613Abscisic Acid rescues the root meristem defect of M. truncatula latd mutants
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Vegetative DevelopmentHarris, Jeanne M.; Liang, Yan.root apical meristem
nodule
Medicago truncatula
Abscisic Acid
legume
lateral root
619Accentuate the positive: interactions between opposing regulators control stomatal pattern in Arabidopsis
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Cell to Cell and Long distance SignalingBergmann, Dominique; Dong, Juan; Lampard, Gregory; Liu, Tie; MacAlister, Cora.stomata
bHLH transcription factor
asymmetric cell division
guard cell
epidermis
cell-cell signaling
730Actin filament bundling via LIM domains
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Cellular TraffickingThomas, Clément; Hoffmann, Céline; Dieterle, M; Moreau, Flora; Gatti, Sabrina; Papuga, Jessica; Tholl, Stephane; Steinmetz, André.actin
cytoskeleton
LIM domain
actin bundles
612A Genomic and Real Time View of Regenerating Tissue
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Vegetative DevelopmentSena, Giovanni; Wang, Xiaoning; Birnbaum, Kenneth.genomics
regeneration
developmental imaging
675A leucine rich repeat receptor-like kinase has a role in nodule morphogenesis in Phaseolus vulgaris
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Plant Symbiont BiologyJauregui, David; Nava, Noreide; Alvarado, X; Santana, O; Quinto, Carmen.receptor kinase
nodulation
Symbiosis
646Altered auxin transport and root development in the scd1 mutant
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Protein TargetingMetcalf, Kasee; Falbel, Tanya; Muday, Gloria K.auxin
lateral root
PIN proteins
Rab
642Analysis of an auto-active Hcr9 disease resistance protein reveals residues responsible for activation, repression and enhancement of signalling activity
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Plant DefenseAnderson (nee Barker), Claire.auto-active
disease resistance protein
leucine-rich repeat
703Analysis of the Arabidopsis thaliana SON1 F-Box Protein and Putative Substrates
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Protein Modification and TurnoverSt. Pierre, Benoit; Argueso, Cristiana; Heim, John; Matthews, Dwight E.; Delaney, Terrence P..protein degradation
F-Box protein
SAR
681A novel plant-specific splicing factor regulates Flowering in Arabidopsis
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Reproductive DevelopmentAli, Gul; Palusa, Saiprasad; Golovkin, Maxim; Prasad, Jayendra; Manley, James; Reddy, Anireddy S. N..splicing factor
flowering
pre-mRNA splicing
serine/arginine-rich proteins
alternative splicing
Arabidopsis
651An unusual glutaredoxin from the arsenic hyperaccumulator fern Pteris vittata L. regulates intracellular arsenite.
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Heavy Metals and PhytoremediationSundaram, Sabarinath; Rathinasabapathi, Bala; Ma, Lena; Rosen, Barry.Arsenic phytoremediation
Glutaredoxin
brake fern
oxidative stress
aquaglyceroporin
733Applied water deficits accelerate ripening and induce changes in gene expression regulating flavonoid biosynthesis in grapevine
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Water RelationsCastellarin, S.D.; Gambetta, G.A.; Matthews, M.A..Water stress
anthocyanin
flavonol
684A putative CCAAT-binding transcription factor is a regulator of flowering timing in Arabidopsis
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Reproductive DevelopmentWu, Yajun; Cai, Xiaoning; Ballif, Jenny; Endo, Saori; Davis, Elizabeth; Liang, Mingxiang; Chen, Dong; DeWald, Daryll; Kreps, Joel; Zhu, Tong; Harper, Jeffery.flower timing
CCAAT-binding transcription factor
Arabidopsis
694Arabidopsis APP1 is a rate limiting component of Auxin signalling required for activation of DR5-like Auxin response elements
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Auxin BiologySrinivas, Makam; Li, Nanbing; Legas, Sheenalay; Sanjai, Deepti; Peer, Wendy; Murphy, Angus.auxin
AtAPP1
DR5-GUS
Signaling
AUX-IAA
667Arabidopsis Calcium Sensors Regulate Transition to Flowering and Nitric Oxide Accumulation
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Environmental SignalingTsai, Yu-Chang; Delk, Nikki; Chowdhury, Naweed; Braam, Janet.Calmodulin-like
nitric oxide
flowering
654Arabidopsis HAP2 (GCS1) is sperm-specific, required for pollen tube guidance, and essential for fertilization
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Pollen BiologyFrank, Aubrey, C; von Besser, Kiera; Wong, Julian, L; Chaibang, Adisorn; Heyward, Keith; Preuss, Daphne; Johnson, Mark A.pollen tube guidance
double fertilization
membrane fusion
sperm
666Arabidopsis Receptor for Activated C Kinase 1 (RACK1) scaffold proteins regulate diverse environmental stress signaling pathways
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Environmental SignalingUllah, Hemayet; Uvetta, Dozier; McLauchlin, April; Kundu, Nabanita; Fennel, Herman.Drought
oxidative stress
Photosynthesis
protein-protein interaction
RACK1
split-ubiquitin
photorespiration
725A regulatory role of histidine in Arabidopsis metabolism and growth revealed by the low oil 1 mutant that corresponds to ATP-Phosphoribosyl Transferase 1, a key enzyme of histidine biosynthesis
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Regulation of MetabolismShui, Wang; Guirong, Zhang; Wang, Hongyun; Ulanov, Alexander; Lozovaya, Vera; Lin, Yun.histidine
amino acid
primary metabolism
phytohormone
Lipids
702A role for peroxins in peroxisome associated protein degradation
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Protein Modification and TurnoverMonroe-Augustus, Melanie; Lingard, Matthew J.; Bartel, Bonnie.peroxisomal matrix protein import
peroxisomal matrix protein degradation
639A sorbitol dehydrogenase deficiency reduces kernel size in maize
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Seed Biologyde Sousa, S.M.; Hunter, C.T.III; Ankumah, N.; Avigne, W.T.; Koch, K.E..maize
sorbitol
kernel
phenotype
SDH
665A strong Arabidopsis guard cell promoter
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Environmental SignalingYang, Yingzhen; Costa, Alex; Schroeder, Julian.guard cell
promoter
calcium imaging
690Auxin, actin, and growth of the Arabidopsis thaliana primary root
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Auxin BiologyRahman, Abidur; Bannigan, Alex; Sulaman, Waheeda; Pechter, Priit; Blancaflor, Elison; Baskin, Tobias.auxin
actin
2,4-D
cell division
PIN proteins
707Biochemical Analysis of Plant FtsZ1 and FtsZ2
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Organelle biologyOlson, Bradley; Osteryoung, Katherine.FtsZ
Chloroplast Division
Tubulin
701Biochemical and Functional Studies of S-RNase-Mediated Self-incompatibility in Petunia inflata
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Protein Modification and TurnoverHua, Zhihua; Meng, Xiaoying; Kao, Teh-hui.self-incompatibility
protein-protein interaction
protein degradation
ubiquitination
SLF like gene
632Blue-light dependent stabilization of ZEITLUPE requires the LOV domain in Arabidopsis
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RhythmsFujiwara, Sumire; Kim, Woe-Yeon; Suh, Sung-Suk; Kim, Jeongsik; Kim, Yumi; Han, Linqu; David, Karine; Putterill, Joanna; Nam, Hong Gil; Somers, David E..circadian
ZEITLUPE
ZTL
blue light
clock
685Breeding and selection of new, high-yielding varieties of shrub willow (Salix spp.) for bioenergy, biofuels, and bioproducts
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Bio-Energy CropsSmart, Lawrence B.; Cameron, Kimberly D.; Serapiglia, Michelle J.; Volk, Timothy A.; Abrahamson, Lawrence P..ethanol
biorefinery
energy crop
biomass/energy
genetics
630Ca2+/CaM signaling through AtGTL1 mediates drought stress adaptation
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Abiotic StressYoo, Chan Yul; Jin, Jing Bo; Miura, Kenji; Jin, Yin Hua; Gosney, Michael; Mickelbart, Michael V.; Bressan, Ray A.; Hasegawa, Paul M..Drought
Ca2+
Calmodulin
722Calcium Dependent Protein Kinases: A Critical Role in Pollen Tube Growth
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Intracellular SignalingBarron, Yoshimi; Romanowsky, Shawn; Myers, Candace; Harper, Jeffrey.kinase
kinase signaling
pollen tube
reproductive development
calcium dependent protein kinase
genetics
protein-protein interaction
pollen
male defect
plasma membrane
Arabidopsis
calcium signaling
protein kinase signaling
intracellular signaling
Signaling
acylation
isoform specificity
656Cell-to-cell communication in pollen tube reception at the female gametophyte
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Pollen BiologyKessler, Sharon; Escobar, Juan-Miguel; Grossniklaus, Ueli.pollination
receptor kinase
synergid
fertilization
FERONIA
pollen tube
668Conservation and divergence of petal and stamen identity genes between Arabidopsis and Thalictrum, a basal eudicot
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Evolution of Development and PhysiologyDi Stilio, Verónica S.; Lauri, Andrea; Eiford, Laura L.; Horton, Melissa G.; Zachgo, Sabine.evo devo
Floral development
MADs box genes
APETALA3
B class genes
Thalictrum
Ranunculaceae
basal Eudicot
629Cyclic Electron Transport Protects against Moderate Heat Stress in Arabidopsis thaliana
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Abiotic StressZhang, Ru; Sharkey, Thomas D..Photosynthesis
heat stress
cyclic electron transport
electrochromic shift
700CYP703: an ancient cytochrome P450 in land plants catalyzing the C-7 hydroxylation of lauric acid for sporopollenin formation in pollen
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Secondary MetabolismMorant, Marc; Jørgensen, Kirsten; Schaller, Hubert; Pinot, Franck; Møller, Birger L.; Werck-Reichhart, Danièle; Bak, Søren.exine
pollen
cytochrome P450
609Deletion and Duplication Detection in Arabidopsis using Tiling Arrays
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Emerging Genome TechnologiesBaxter, Ivan; Williams, Rick; Emerson, JJ; Okamoto, Ken; Salt, David; Borevitz, Justin.Tiling arrays
Deletion mapping
Arabidopsis
608Detecting circadian clock regulated transcription using genome tiling arrays
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Emerging Genome TechnologiesHazen, Samuel; Naef, Felix; Quisel, Thomas; Borevitz, Justin; Kay, Steve.Tiling arrays
circadian clock
2399Development of rapid-cycling Brassica rapa as a model for teaching genetics
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Education & OutreachAmasino, Richard; Woody, Scott.
633Dissection of Calcium Signalling Pathways in the Arabidopsis Circadian Clock
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RhythmsHubbard, Katharine; Dodd, Antony; Gardner, Michael; Hotta, Carlos; Dalchau, Neil; Davies, Julia; Webb, Alex.Arabidopsis
circadian
Signalling
Calcium
cADPR
687Does increased daily carbon assimilation coupled with a higher Leaf Area Index and longer growing season explain the difference in productivity between two potential bioenergy crops?
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Bio-Energy CropsDohleman, Frank G.; Wang, Dafu; Heaton, Emily A.; Leakey, Andrew D.B.; Long, Stephen P..bioenergy crops
Miscanthus x giganteus
switchgrass
723Down-regulation of a novel small gene confers a starch excess phenotype in Arabidopsis
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Regulation of MetabolismLi, Ling; Nettleton, Dan; Wurtele, Eve.gene expression
starch excess
novel small gene
starch synthase
microarray
638During Biogenesis of Nucellus Cells in Developing Seeds, Arabidopsis Protein Disulfide Isomerase 5 Traffics Together with Cysteine Proteases to Protein Storage and Lytic Vacuoles
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Seed BiologyOndzighi-Assoume, Christine Andeme; Christopher, David A.; Cho, Eun-Ju; Shoeng-Chang, Shu; Staehelin, L. Andrew.seed development
641EDM2, a novel transcriptional regulator mediating disease resistance in Arabidopsis thaliana
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Plant DefenseTsuchiya, Tokuji; Wei, Yu-Hung Linda; Eulgem, Thomas.disease resistance protein
transcription factor
664Elevated CO2 increases susceptibility of soybean to natural herbivores by defeating induction of cysteine proteinase inhibitors.
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Environmental SignalingZavala, Jorge; Casteel, Clare; Berenbaum, May; De Lucia, Evan.global change
defense
cysteine proteinase inhibitors
Soybean
plant-insect interaction
insect herbivory
650Endophyte assisted phytoremediation of Trichloroethylene(TCE) by Sweet potato plants
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Heavy Metals and Phytoremediationkhan, zareen; doty, sharon.Phytoremediation
endophytes
sweet potato
trichloroethylene
709Enhanced carotenoid accumulation as a result of alteration of metabolic sinks in transgenic plants
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Organelle biologyLopez, Alex; Van Eck, Joyce; Conlin, Brian; Paolillo Jr, Dominick; Li, Li.carotenoids
metabolic sink
627ESK1 Is a Novel Component of Freezing Tolerance
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Abiotic StressXin, Zhanguo; Chen, Junping.freezing tolerance
drought tolerance
salinity tolerance
microarray
623Estimating long-distance phloem behavior with sieve-element targeted, fluorescence labeled membrane proteins
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Cellular TechnologiesThompson, Matthew V.; Wolniak, Stephen M..phloem
sieve plate
sieve element
anatomy
fluid mechanics
intercellular protein targeting
companion cell
plasmodesmata
713ETR1 Histidine Kinase Activity of Arabidopsis Promotes Plant Growth
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ABA and EthyleneYoo, Sang-Dong; Cho, Young-Hee; Sheen, Jen.ETR1 Histidine Kinase
protein kinase signaling
growth
649Evolutionary and Ecological Aspects of Selenium Hyperaccumulation
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Heavy Metals and PhytoremediationFreeman, John L.; Quinn, Colin F.; Galeas, Miriam L.; Pilon-Smits, Elizabeth A.H..Selenium Hyperaccumulation
evolution
Phytotoxicity
Tolerance
Elemental Defense
Biotransformation
Se fluxes in troposheres
669Evolution of an enhancer region that regulates PETAL LOSS expression in the perianth of the Arabidopsis flower
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Evolution of Development and PhysiologyKilinc, Aydin; Smyth, David R.perianth
PETAL LOSS
retrotransposon
Brassicales
tetramery
Arabidopsis
637Exceptional longevity of fruits of Nelumbo nucifera: heat-hardy (100oC) proteins
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Seed BiologyShen-Miller, J.; Xie, Y.; Wooding, K.; Yang, Y.; Villa, S.; Zhang, H.; Lindner, P.; Loo, J.; Clarke, S..longest-living fruits
abiotic and biotic stresses, defence- and repair-related proteins, heat-stable (100C) proteins, Nelumbo nucifera
735Functional analysis of hydrophlins LEA4 in Arabidopsis thaliana in drought adaptive response
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Water RelationsOlvera-Carillo, Yadira; Reyes, Jose Luis; Campos, Francisco; Covarrubias, Alejandra.LEA proteins
Water stress
Arabidopsis
Drought resistance
661Functional characterization of Lysine-rich AGPs by reverse genetics
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Cell WallsZhang, Yizhu; Yang, Jie; Showalter, Allan M..Arabidopsis
microarray
hyperglycosylated hydoxyproline-rich glycoproteins
GPI anchor
670Functional Characterization of Novel Rosaceae Genes in Transgenic Arabidopsis and Strawberry (Fragaria spp.)
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Evolution of Development and PhysiologyFolta, Kevin M.; Davis, Thomas; Steeves, Cody; Clancy, Maureen.Fragaria
Rosaceae
Functional genomics
novel regulators
gene function
680GA and Sugar Signaling Interference in Germinating Cereal Grains: Mechanism of MYBGA and MYBS1 Interaction in the Regulation of α-Amylase Gene Expression
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Mechanisms of Gene RegulationYu, Su-May; Hong, Ya-Fang.Hormone signaling
rice
sugar signaling
alpha-amylase
seed germination
704Genetic Analysis of the SUMO Conjugation Machinery in Arabidopsis
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Protein Modification and TurnoverMiller, Marcus; Saracco, Scott; Vierstra, Richard.SUMO
ubiquitination
Post Translational Modification
672Genomics and RNAi Functional Analysis of a Highly Expressed Nod Gene Family in Phaseolus vulgaris
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Plant Symbiont BiologyOlivares, JE; Estrada, G; Campos, Francisco; Guillén, G; Alvarado, X; Díaz, C; Santana, O; Sanchez, F.Bean nodulin function
secretory pathway
default death pathway
Functional genomics
transgenic bean nodules
671Gibberellin Biosynthesis and Function in Bryophytes
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Evolution of Development and PhysiologyAnterola, Aldwin; Shanle, Erin; Mansouri, Katayoun; Schuette, Scott; Vidal-Russell, Romina; Coates, Robert; Von Schwartzenberg, Klaus; Renzaglia, Karen.bryophytes
gibberellins
phytohormone
evolution
diterpenoid
spore germination
mosses
antheridiogen
615Growth control in plants by chromatin modifying complexes
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Vegetative DevelopmentHimanen, K; Nelissen, H; Fleury, D; Cnops, G; Boccardi, T; Inze, D; Van Lijsebettens, M.growth
leaf
chromatin modification
Arabidopsis
Elongator
histone monoubiquitination
716HEMERA: a novel regulator required for phytochrome nuclear body localization and photomorphogenesis in Arabidopsis
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PhotomorphogenesisChen, Meng; Chory, Joanne.Phytochrome
photomorphogenesis
chloroplast development
691IBR5, a putative dual-specificity protein phosphatase, affects auxin response independently of TIR1
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Auxin BiologyStrader, Lucia; Monroe-Augustus, Melanie; Bartel, Bonnie.auxin
Signaling
phosphatase
724Identification of a Protein Kinase and a RING-Finger Protein Involved in Plant Metabolic Response
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Regulation of MetabolismHuang, Yadong; Li, Chunyao; Gibson, Susan.sugar insensitive
Post-germination development
659Identification of primary sequences sufficient for crosslinking proline-rich proteins within the root hair cell wall of Arabidopsis thaliana.
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Cell WallsXiao, Wei; Tierney, Mary.PRP
crosslinking
647Identification of zip codes required for the cisternal ER targeting of rice glutelin RNA
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Protein TargetingWashida, Haruhiko; Sugino, Aya; Kaneko, Sachiyo; Okita, Thomas W.RNA targeting
Endoplasmic reticulum
zip codes
rice
glutelin
protein body
1453Images of plant cell biology on DVD: information for students and a resource for teachers
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Education & OutreachGunning, B.plant cell biology
live cell movies
ultrastructure
atlas of micrographs
699Independent origins of syringyl lignin in vascular plants
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Secondary MetabolismWeng, Jing-Ke; Chapple, Clint.lignin biosynthesis
phenylpropanoid metabolism
Selaginella moellendorffii
P450
2501Integrating Computational Thinking into Biology Education and Outreach
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Education & OutreachNapoli, Carolyn.
626Involvement of "senescence associated vacuoles" in the degradation of chloroplast proteins in tobacco leaves
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Cellular TechnologiesMartinez, Dana E; Costa, Lorenza; Otegui, Marisa; Guiamet, Juan J.leaf senescence 
protein degradation
vacuoles
683Involvement of the Solanum chacoense MAPKKK ScFRK1 in embryo sac development
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Reproductive DevelopmentLafleur, Edith; Kapfer, Christelle; Gray-Mitsumune, Madoka; Matton, Daniel P..Embryo sac development
pollen tube guidance
egg apparatus
kinase
658Is rhamnogalacturonan-I a key scaffolding element in the pectin network of arabidopsis cell walls?
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Cell WallsZhou, Shaohua; Carpita, Nicholas C; McCann, Maureen C.Arabidopsis
cell wall
rhamnogalacturonan-I
rhamnogalacturonan lyase
Pectin
cell expansion
711KEG, a Novel RING E3/Kinase/Ankyrin Protein Essential for Arabidopsis Growth and Development is Involved in Abscisic Acid Signaling
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ABA and EthyleneStone, Sophia; Williams, Luis; Farmer, Lisa; Vierstra, Richard; Callis, Judy.RING E3 ligase
ubiquitination
Abscisic Acid
kinase
ABI5
Hormone signaling
Phosphorylation
Post-germination development
protein degradation
Ankyrin repeats
Stress response
620Long Distance Signals Regulate Lateral Root Emergence in Arabidopsis thaliana
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Cell to Cell and Long distance SignalingDeak, Karen; Muday, Gloria K; Malamy, Jocelyn.lateral root
auxin
Abscisic Acid
648Luciferase-based genetic screening of cadmium response mutants
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Heavy Metals and PhytoremediationSung, Dong-Yul; Schroeder, Julian.Cadmium
Mutant Screening
Luciferase
heavy metal
Arabidopsis
689Maize cell wall gene network: A plant systems approach towards enhancing biomass for biofuels
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Bio-Energy CropsPenning, Bryan; Tewari, Jagdish; Hunter III, Charles; Olek, Anna; Vermerris, Wilfred; Davis, Mark; Thomas, Steven; Koch, Karen; McCarty, Donald; McCann, Maureen; Carpita, Nicholas C.cell wall
genomics
comparative functional genomics
maize
FTIR
mutants
C4 grass
712MAP kinases in ROS-mediated ABA Signaling
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ABA and EthyleneSong, Charlotte; Kwak, June.Hormone signaling
reactive oxygen species
MAP kinases
abiotic stress
636Mechanisms for oxygen sensing and balancing in naturally hypoxic crop plant seeds
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Seed BiologyRolletschek, Hardy; Wobus, Ulrich; Borisjuk, Ljudmilla.hypoxia
crop
676Medicago truncatula DMI1 localizes to the nuclear envelope and regulates Nod factor-induced calcium spiking
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Plant Symbiont BiologyVenkateshwaran, Muthusubramanian; Riely, Brendan K.; Peiter, Edgar; Sun, Jongho; Heckmann, Anne B.; Lougnon, Geraldine; Edwards, Anne; Otegui, Marisa; Freshour, Glenn; Hahn, Michael G.; Sanders, Dale; Oldroyd, Giles E. D.; Downie, Allan J.; Cook, Douglas R.; Ane, Jean-Michel.Legume nodulation
Symbiosis
ion channel
1456Meta!Blast: development of a video game of cell and metabolic biology
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Education & OutreachBassham, Diane; Brown, Trevor; Brown, Tyler; Dickerson, Julie; Herrnstadt, Steve; Kabala, David; Miller, Elizabeth; Syrkin-Nikolau, Mashette; Vue, Gaoder; Wurtele, Eve.plant cell biology
metabolic biology
gene regulation
game
education
virtual reality
643Methyl Salicylate is a Critical Mobile Signal for Plant Systemic Acquired Resistance
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Plant DefensePark, Sang-Wook; Kaimoyo, Evans; Mosher, Stephen; Kumar, Dhirendra; Klessig, Daniel F..systemic acquired resistance
salicylic acid
salicylic acid-binding protein 2
methyl salicylate
mobile SAR signal
688Mining Genetic Diversity of Sweet Sorghum in the US Collection for Biofuel Production
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Bio-Energy CropsWang, Ming Li; Erpelding, John; Yu, Jianming; Pederson, Gary.biofuel-crop
Genetic diversity
697Modeling of plant P450 monooxygenase structures: a three-dimensional perspective on the evolution of their catalytic activities
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Secondary MetabolismRupasinghe, Sanjeewa G.; Schuler, Mary A..cytochrome P450
molecular modeling
Arabidopsis
catalytic sites
secondary metabolism
614Molecular Mechanisms for KNOX Gene Silencing by the Arabidopsis ASYMMETRIC LEAVES1 Complex
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Vegetative DevelopmentGuo, Mengjuan; Julie, Thomas; Galen, Collins; Marja, Timmermans.KNOX
AS1-AS2
antisense RNA
Gene Silencing
protein-DNA interaction
731Myosin motors are required for optimal tip growth of root hairs
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Cellular TraffickingNebenführ, Andreas; Park, Eunsook; Soltanian, Niloufar.myosin
root hair
organelle movement
cytoplasmic streaming
710N-acylethanolamine (NAE) metabolism impacts growth and interacts with ABA signaling in Arabidopsis thaliana seedlings
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ABA and EthyleneBlancaflor, Elison B; Teaster, Neal; Tang, Yuhong; Motes, Christy M; Wang, Yuh-Shuh; Wiant, William C; Cotter, Matthew Q; Kilaru, Aruna; Venables, Barney J; Hasenstein, Karl; Gonzalez, Gabriel; Chapman, Kent D.Arabidopsis
Abscisic Acid
Lipids
N-acylethanolamine
677Nonredundant functions of Aux/IAA proteins
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Mechanisms of Gene RegulationTiwari, Shiv; Hagen, Gretchen; Guilfoyle, Tom.
692Novel Pathway for IAA Biosynthesis in Maize Endosperm
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Auxin BiologyHendrickson Culler, Angela; Cohen, Jerry D..auxin
Indole-3-acetic acid
biosynthesis
718Nuclear Glucose Signaling through Hexokinase1 and HUPs in Arabidopsis
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Intracellular SignalingCho, Young-Hee; Yoo, Sang-Dong; Sheen, Jen.nuclear HXK1 complex
HXK1 unconventional partner
682NUCLEAR PORE ANCHOR, the Arabidopsis homolog of Tpr/Mlp1/Mlp2/Megator, is involved in mRNA export and SUMO homeostasis and affects diverse aspects of plant development
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Reproductive DevelopmentXu, Xianfeng, Morgan; Rose, Annkatrin; Muthuswamy, Sivaramakrishnan; Jeong, Sun Yong; Venkatakrishnan, Sowmya; Zhao, Qiao; Meier, Iris.Nuclear Envelope
Nuclear Pore
SUMO
flowering
mRNA export
development
721Null mutation of an Arabidopsis copine gene compromises the specificity of calcium signaling
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Intracellular SignalingLee, Tzuu-fen; McNellis, Timothy W..calcium influx
defense
copine
calcium signaling specificity
640Phylloplane Proteins: Emerging Defenses at the Aerial Frontline
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Plant DefenseShepherd, Ryan; Kroumova, Antoaneta; Wagner, George.trichome
leaf surface
antimicrobial
714PIF1 directly regulates chlorophyll biosynthesis to optimize the greening process in Arabidopsis
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PhotomorphogenesisMoon, Jennifer; Zhu, Ling; Shen, Hui; Huq, Enamul.Arabidopsis
Chlorophyll biosynthesis
Light signaling
Phytochrome
gene expression
736Plasma membrane aquaporins are widely expressed in maize and form heteromers to regulate plant water movement
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Water RelationsHachez, Charles; Zelazny, Enric; Muylaert, Mélanie; Cavez, Damien; Heinen, Robert; Veselov, Dmitry; Chaumont, François.aquaporin
membrane protein
gene expression
root development
shoot
Water relations
706Plastidic type I signal peptidase 1 has a functional role in both the envelope and thylakoids of Arabidopsis chloroplasts.
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Organelle biologyShipman, Rebecca; Inoue, Kentaro.chloroplast proteases
chloroplast protein transport
organelle biogenesis
signal peptidase
thylakoid
652Pollen tubes release ATP as they grow and their continued growth requires the activity of pollen ectoapyrases that hydrolyze the secreted ATP
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Pollen BiologyTorres, Jonathan; Wu, Jian; Roux, Stanley.growth
extracellular ATP
727RabA4b and its effector PI-4Kβ are key components for regulating secretory vesicle size in Arabidopsis
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Cellular TraffickingKang, Byung-Ho; Preuss, Mary; Mastronarde, David; Cavalier, David; Staehelin, L. Andrew; Nielsen, Erik.Golgi
secretory vesicle
cell wall
polysaccharide
726Regulatory Protein-Protein Interactions in Metabolism: The Case of Cysteine Biosynthesis
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Regulation of MetabolismJez, Joseph M.; Kumaran, Sangaralingam; Francois, Julie A..cysteine
protein-protein interaction
x-ray crystallography
732Relationship between stomatal closure, and xylem vulnerability to cavitation in poplars
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Water RelationsArango, Adriana; Zwiazek, Janusz; Thomas, Barb; Tyree, Mel.poplars
xylem vulnerability
stomatal conductance
turgor potential
678Riboswitch mediated gene control in plants
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Mechanisms of Gene RegulationWachter, Andreas; Tunc-Ozdemir, Meral; Grove, Beth C.; Green, Pamela J.; Shintani, David K.; Breaker, Ronald R..riboswitch
aptamer
thiamine
3´ terminus processing
628Salt-induced changes in the plasma membrane proteome of the halotolerant alga Dunaliella salina
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Abiotic StressKatz, Adriana; Waridel, Patrice; Shevchenko, Andrej; Pick, Uri.membrane protein
proteomics
BN gel
salinity tolerance
plasma membrane
LC-MS/MS
644Secretory Carrier Membrane Proteins (SCAMPs) in Arabidopsis thaliana
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Protein TargetingRobertson, Amber L.; Rao, Hongyu; Wang, Wuyi; Patterson, Sara E..SCAMP
Abscission
secretory pathway
645Stimulation of transit-peptide release and ATP hydrolysis by a cochaperone during protein import into chloroplasts
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Protein TargetingChu, Chiung-chih; Chou, Ming-lun; Chen, Lih-jen; Akita, Mitsuru; Li, Hsou-min.chloroplast protein transport
cochaperone
AAA protein
ATPase activation
610Survey of splicing variation and allele specific expression in natural accessions of Arabidopsis thaliana using SNP-tiling array
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Emerging Genome TechnologiesZhang, Xu; Byrnes, Jake; Borevitz, Justin.SNP
tiling array
splicing
allele specific expression
728Targeting of PAPK1 Involves Association with Cytoskeleton and Vesicle-like Organelles
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Cellular TraffickingBen-Nissan, Gili; Lee, Jung-Youn.plasmodesmata
PAPK1
Phosphorylation
protein targeting
microtubule
cell-cell signaling
635The circadian clock and light signaling converge on PIF4 and PIF5 to control rhythmic hypocotyl growth
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RhythmsNozue, Kazunari; Harmer, Stacey, L; Covington, Michael, F; Duek, Paula; Lorrain, Séverine; Fankhauser, Christian; Maloof, Julin, N.clock
light
hypocotyl
rhythm
634The circadian clock regulates auxin signaling in an organ-specific manner
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RhythmsCovington, Michael, F; Harmer, Stacey, L.auxin
clock
circadian gating
gravitropism
hypocotyl elongation
rhythm
674The common nod genes are required for mature biofilm formation in Sinorhizobium meliloti
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Plant Symbiont BiologyFujishige, N.A.; Lum, M.R.; De Hoff, P.L.; Hirsch, Ann M..nodulation genes
biofilm
nitrogen fixation
715The Effect of Different Subcellular Targeting of Cryptochrome 1 on Blue Light Regulated Photomorphogenesis
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PhotomorphogenesisWu, Guosheng; Spalding, Edgar.Cryptochrome 1
photomorphogenesis
679The H subunit of eukaryotic translation initiation factor 3 contributes to the efficient translation of mRNAs with upstream open reading frames
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Mechanisms of Gene RegulationKim, Byung-Hoon; Roy, Bijoyita; Cai, Xue; Vaughn, Justin; Zhou, Fujun; Kim, Tae-Houn; von Arnim, Albrecht.uAUG
uORF
5' UTR
eIF3h
translation
polysome
microarray
657The pollen-specific protein kinase ZmPTI1a from maize co-localizes with callose deposition and facilitates a competitive advantage to the male gametophyte
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Pollen BiologyLorbiecke, René; Pinto, Sheena; Kluth, Jantjeline; Pusunc, Susan; Buchert, Eva; Herrmann, Markus M.; Wienand, Udo.pollen
hypersensitive response
myristoylation
RNAi
protein kinase signaling
callose
617The Protein Phosphatase Type 2C Proteins, POL and PLL1 are Required for Multiple Asymmetric Cell Divisions During Plant Development
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Cell to Cell and Long distance SignalingGagne, Jennifer M.; Song, Sang-Kee; Clark, Steven E..CLAVATA
meristem
POLTERGEIST
618Tie-dyed1 encodes a novel protein controlling carbohydrate accumulation in leaves
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Cell to Cell and Long distance SignalingBraun, David; Ma, Yi; Baker, R. Frank; Slewinski, Tom.maize
leaf traits
tie-dyed1
clonal analysis
vasculature
Endomembrane
hyperaccumulate carbohydrates
sucrose transport
705Toward understanding plant peroxisome proliferation
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Organelle biologyZhang, Xinchun; Orth, Travis; Reumann, Sigrun; Fan, Jilian; Wenzel, Dirk; Quan, Sheng; Kyaw, Aung; Hu, Jianping.peroxisome division and proliferation
PEX11
dynamin-related proteins (DRPs)
624Toward zinc finger nucleases-mediated gene targeting in plants
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Cellular TechnologiesTovkach, Andriy; Zeevi, Vardit; Tzfira, Tzvi.Gene targeting
zinc finger nucleases
DNA repair
2555Two CHS-interacting proteins, CyAP and ENTH-like, manipulate flavonoid production in response to auxin
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Secondary MetabolismWatkinson, Jonathan I.; Winkel, Brenda S. J..auxin
aminopeptidase
vesicular-transport
flavonol
roots
gravitropism
720Two membrane-bound bZIP transcription factors of Arabidopsis are activated in response to ER stress
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Intracellular SignalingLiu, Jianxiang; Srivastava, Renu; Che, Ping; Howell, S.H.ER stress
bZIP transcription factors
AtS1P
Arabidopsis
625Use of peptide aptamers for broad-based geminivirus disease resistance
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Cellular TechnologiesLopez-Ochoa, Luisa; Hanley-Bowdoin, Linda.Geminivirus Resistance
broad based resistance
peptide aptamers
717UV-B Signalling Pathways in Arabidopsis: UVR8 Defines a Photomorphogenic Pathway that Regulates Transcription
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PhotomorphogenesisBrown, Bobby A.; Cloix, Catherine; Headland, Lauren R.; Herzyk, Pawel; Kaiserli, Eirini; Jenkins, Gareth I..photomorphogenesis
ultraviolet-B radiation
UV RESISTANCE LOCUS 8
663Viral-induced gene silencing of cellulose synthase and cellulose synthase-like genes in barley reveals a tightly controlled gene network for cell wall biosynthesis
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Cell WallsHeld, Michael; Kessans, Sarah; Brandt, Amanda; Yong, Weidong; Scofield, Steven; Carpita, Nicholas C.Cellulose
cell wall
VIGS
barley

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